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Analytical and Clinical Performance of the CDC Real Time RT-PCR Assay for Detection and Typing of Dengue Virus

机译:CDC实时RT-PCR检测和登革热病毒分型的分析和临床表现

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摘要

Dengue is an acute illness caused by the positive-strand RNA dengue virus (DENV). There are four genetically distinct DENVs (DENV-1–4) that cause disease in tropical and subtropical countries. Most patients are viremic when they present with symptoms; therefore, RT-PCR has been increasingly used in dengue diagnosis. The CDC DENV-1–4 RT-PCR Assay has been developed as an in-vitro diagnostic platform and was recently approved by the US Food and Drug Administration (FDA) for detection of dengue in patients with signs or symptoms of mild or severe dengue. The primers and probes of this test have been designed to detect currently circulating strains of DENV-1–4 from around the world at comparable sensitivity. In a retrospective study with 102 dengue cases confirmed by IgM anti-DENV seroconversion in the convalescent sample, the RT-PCR Assay detected DENV RNA in 98.04% of the paired acute samples. Using sequencing as a positive indicator, the RT-PCR Assay had a 97.92% positive agreement in 86 suspected dengue patients with a single acute serum sample. After extensive validations, the RT-PCR Assay performance was highly reproducible when evaluated across three independent testing sites, did not produce false positive results for etiologic agents of other febrile illnesses, and was not affected by pathological levels of potentially interfering biomolecules. These results indicate that the CDC DENV-1–4 RT-PCR Assay provides a reliable diagnostic platform capable for confirming dengue in suspected cases.
机译:登革热是由正链RNA登革热病毒(DENV)引起的急性疾病。在热带和亚热带国家,有四种遗传上不同的DENV(DENV-1–4)引起疾病。大多数患者出现症状时会出现病毒血症。因此,RT-PCR已越来越多地用于登革热诊断。 CDC DENV-1–4 RT-PCR分析已开发为体外诊断平台,最近已获得美国食品和药物管理局(FDA)的批准,可用于检测轻度或重度登革热的体征或症状的登革热。该测试的引物和探针设计用于以可比较的灵敏度检测来自世界各地当前正在传播的DENV-1–4菌株。在一项对102例登革热样品中通过IgM抗DENV血清转化确诊的登革热病例的回顾性研究中,RT-PCR分析检测了98.04%配对急性样品中的DENV RNA。使用测序作为阳性指标,RT-PCR分析在86名带有单个急性血清样本的可疑登革热患者中具有97.92%的阳性一致性。经过广泛的验证,当在三个独立的测试地点进行评估时,RT-PCR分析的性能可高度再现,对于其他高热疾病的病原体不会产生假阳性结果,并且不受潜在干扰生物分子的病理水平影响。这些结果表明,CDC DENV-1–4 RT-PCR分析提供了可靠的诊断平台,能够在可疑病例中确诊登革热。

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